Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Gm14350-201ENSMUST00000116642 640 ntBASIC11.83□□□□□ -0.52
Lims1Q99JW4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.83□□□□□ -0.52
Lims1Q99JW4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.83□□□□□ -0.52
Lims1Q99JW4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lims1Q99JW4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Matn2-203ENSMUST00000226766 3252 ntBASIC11.82□□□□□ -0.52
Lims1Q99JW4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.82□□□□□ -0.52
Lims1Q99JW4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Gm28631-201ENSMUST00000190740 334 ntBASIC11.82□□□□□ -0.52
Lims1Q99JW4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.82□□□□□ -0.52
Lims1Q99JW4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lims1Q99JW4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.81□□□□□ -0.52
Lims1Q99JW4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Gm15371-201ENSMUST00000117057 784 ntBASIC11.81□□□□□ -0.52
Lims1Q99JW4 Gm12291-201ENSMUST00000121627 311 ntBASIC11.81□□□□□ -0.52
Lims1Q99JW4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.81□□□□□ -0.52
Lims1Q99JW4 Gm44069-201ENSMUST00000204898 506 ntBASIC11.81□□□□□ -0.52
Lims1Q99JW4 Gm19220-201ENSMUST00000222682 803 ntBASIC11.81□□□□□ -0.52
Lims1Q99JW4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lims1Q99JW4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms