Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Mir7023-201ENSMUST00000185093 64 ntBASIC13.08□□□□□ -0.32
Cdk9Q99J95 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.08□□□□□ -0.32
Cdk9Q99J95 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.08□□□□□ -0.32
Cdk9Q99J95 Shd-206ENSMUST00000225145 998 ntBASIC13.08□□□□□ -0.32
Cdk9Q99J95 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.08□□□□□ -0.32
Cdk9Q99J95 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.08□□□□□ -0.32
Cdk9Q99J95 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk9Q99J95 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.07□□□□□ -0.32
Cdk9Q99J95 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.07□□□□□ -0.32
Cdk9Q99J95 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Gm25144-201ENSMUST00000179561 110 ntBASIC13.07□□□□□ -0.32
Cdk9Q99J95 Gm25352-201ENSMUST00000179815 110 ntBASIC13.07□□□□□ -0.32
Cdk9Q99J95 Gm27618-201ENSMUST00000183671 60 ntBASIC13.07□□□□□ -0.32
Cdk9Q99J95 Gm27622-201ENSMUST00000183779 60 ntBASIC13.07□□□□□ -0.32
Cdk9Q99J95 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdk9Q99J95 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk9Q99J95 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Gm27533-201ENSMUST00000183800 152 ntBASIC13.06□□□□□ -0.32
Cdk9Q99J95 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.06□□□□□ -0.32
Cdk9Q99J95 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk9Q99J95 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms