Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Gm13226-201ENSMUST00000117838 404 ntBASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Gm14921-201ENSMUST00000118643 908 ntBASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Gm14704-201ENSMUST00000120300 874 ntBASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdha9Q91Y11 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Gm14660-201ENSMUST00000119809 575 ntBASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Gm12363-201ENSMUST00000122250 668 ntBASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha9Q91Y11 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdha9Q91Y11 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdha9Q91Y11 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdha9Q91Y11 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.77□□□□□ -0.2
Pcdha9Q91Y11 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdha9Q91Y11 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdha9Q91Y11 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Snord83b-201ENSMUST00000104546 94 ntBASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Pcdha9Q91Y11 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Gm11425-201ENSMUST00000119608 498 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.76□□□□□ -0.21
Pcdha9Q91Y11 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms