Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm8652-201ENSMUST00000181363 964 ntBASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm29608-201ENSMUST00000190444 463 ntBASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga4Q91XY4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Gm10156-201ENSMUST00000122364 462 ntBASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Gm24644-201ENSMUST00000157114 139 ntBASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga4Q91XY4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Gm12390-201ENSMUST00000117897 397 ntBASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Gm7561-201ENSMUST00000211203 886 ntBASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhga4Q91XY4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms