Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx41Q91VN6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gm19184-201ENSMUST00000196798 928 ntBASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gm16372-201ENSMUST00000073088 450 ntBASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Snora73a-201ENSMUST00000082453 205 ntBASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gm10268-201ENSMUST00000085340 555 ntBASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx41Q91VN6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Gm26927-201ENSMUST00000182385 965 ntBASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Gm7399-201ENSMUST00000032395 858 ntBASIC14.89□□□□□ -0.03
Ddx41Q91VN6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ddx41Q91VN6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx41Q91VN6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms