Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.83□□□□□ -0.36
Vsx1Q91V10 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Gm2445-201ENSMUST00000182798 989 ntBASIC12.83□□□□□ -0.36
Vsx1Q91V10 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Gm43378-201ENSMUST00000199336 582 ntBASIC12.83□□□□□ -0.36
Vsx1Q91V10 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.83□□□□□ -0.36
Vsx1Q91V10 Gm45118-201ENSMUST00000208928 825 ntBASIC12.83□□□□□ -0.36
Vsx1Q91V10 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vsx1Q91V10 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Gm23200-201ENSMUST00000104379 132 ntBASIC12.82□□□□□ -0.36
Vsx1Q91V10 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Gm12502-201ENSMUST00000120197 444 ntBASIC12.82□□□□□ -0.36
Vsx1Q91V10 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Gm44262-201ENSMUST00000204969 372 ntBASIC12.82□□□□□ -0.36
Vsx1Q91V10 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.82□□□□□ -0.36
Vsx1Q91V10 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.82□□□□□ -0.36
Vsx1Q91V10 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Vsx1Q91V10 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Grk6-205ENSMUST00000224653 2976 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vsx1Q91V10 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vsx1Q91V10 Gm28693-202ENSMUST00000190758 331 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Gm32025-201ENSMUST00000217960 307 ntBASIC12.81□□□□□ -0.36
Vsx1Q91V10 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms