Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.83□□□□□ -0.2
TraipQ8VIG6 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.83□□□□□ -0.2
TraipQ8VIG6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TraipQ8VIG6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gm25668-201ENSMUST00000157700 129 ntBASIC13.82□□□□□ -0.2
TraipQ8VIG6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gm20482-202ENSMUST00000174729 825 ntBASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gm27320-201ENSMUST00000184892 109 ntBASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.82□□□□□ -0.2
TraipQ8VIG6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.82□□□□□ -0.2
TraipQ8VIG6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.82□□□□□ -0.2
TraipQ8VIG6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.82□□□□□ -0.2
TraipQ8VIG6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.82□□□□□ -0.2
TraipQ8VIG6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TraipQ8VIG6 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.81□□□□□ -0.2
TraipQ8VIG6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Gm5904-201ENSMUST00000210286 865 ntBASIC13.81□□□□□ -0.2
TraipQ8VIG6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.81□□□□□ -0.2
TraipQ8VIG6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TraipQ8VIG6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.8□□□□□ -0.2
TraipQ8VIG6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Daam2-202ENSMUST00000224595 1926 ntBASIC13.8□□□□□ -0.2
TraipQ8VIG6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.8□□□□□ -0.2
TraipQ8VIG6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms