Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh18Q8VHR0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh18Q8VHR0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh18Q8VHR0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh18Q8VHR0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Gm27321-201ENSMUST00000185021 205 ntBASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Gm43703-201ENSMUST00000200523 763 ntBASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh18Q8VHR0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Gm6912-201ENSMUST00000117218 544 ntBASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh18Q8VHR0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh18Q8VHR0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh18Q8VHR0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh18Q8VHR0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh18Q8VHR0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh18Q8VHR0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.53□□□□□ -0.4
Pcdh18Q8VHR0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh18Q8VHR0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms