Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Mir8117-201ENSMUST00000184773 107 ntBASIC12.64□□□□□ -0.39
Q8VDP2 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.64□□□□□ -0.39
Q8VDP2 Gm44124-201ENSMUST00000204159 472 ntBASIC12.64□□□□□ -0.39
Q8VDP2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.64□□□□□ -0.39
Q8VDP2 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.64□□□□□ -0.39
Q8VDP2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.64□□□□□ -0.39
Q8VDP2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.64□□□□□ -0.39
Q8VDP2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.64□□□□□ -0.39
Q8VDP2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Q8VDP2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Gm15358-201ENSMUST00000119249 520 ntBASIC12.63□□□□□ -0.39
Q8VDP2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.63□□□□□ -0.39
Q8VDP2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.63□□□□□ -0.39
Q8VDP2 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.63□□□□□ -0.39
Q8VDP2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.63□□□□□ -0.39
Q8VDP2 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.63□□□□□ -0.39
Q8VDP2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.63□□□□□ -0.39
Q8VDP2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.63□□□□□ -0.39
Q8VDP2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.63□□□□□ -0.39
Q8VDP2 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.63□□□□□ -0.39
Q8VDP2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q8VDP2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Q8VDP2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.62□□□□□ -0.39
Q8VDP2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Q8VDP2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Q8VDP2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Q8VDP2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.62□□□□□ -0.39
Q8VDP2 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.62□□□□□ -0.39
Q8VDP2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Q8VDP2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Q8VDP2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Q8VDP2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.62□□□□□ -0.39
Q8VDP2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q8VDP2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.61□□□□□ -0.39
Q8VDP2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q8VDP2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Mir3113-201ENSMUST00000175478 76 ntBASIC12.61□□□□□ -0.39
Q8VDP2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Q8VDP2 Gm2445-201ENSMUST00000182798 989 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms