Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gm2231-201ENSMUST00000125661 612 ntBASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gm25927-201ENSMUST00000175058 117 ntBASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Snora73a-201ENSMUST00000082453 205 ntBASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Mir1247-201ENSMUST00000116706 82 ntBASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ndc1Q8VCB1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Gm16479-201ENSMUST00000121706 932 ntBASIC12.24□□□□□ -0.45
Ndc1Q8VCB1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms