Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc9Q8VC31 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc9Q8VC31 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ccdc9Q8VC31 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Gm13597-201ENSMUST00000121239 375 ntBASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Mir8117-201ENSMUST00000184773 107 ntBASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Gm44771-201ENSMUST00000206975 626 ntBASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Gm18206-201ENSMUST00000207027 926 ntBASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 AC122291.1-201ENSMUST00000228937 5748 ntBASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Gm42141-201ENSMUST00000196534 2172 ntBASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc9Q8VC31 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Thap2-203ENSMUST00000218989 527 ntBASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc9Q8VC31 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc9Q8VC31 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms