Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf7Q8R0S1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Gm13369-201ENSMUST00000119442 987 ntBASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Gm13813-201ENSMUST00000120998 787 ntBASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Gm27486-201ENSMUST00000184923 80 ntBASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Gm7653-201ENSMUST00000214567 508 ntBASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf7Q8R0S1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Gm11637-201ENSMUST00000120601 592 ntBASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Gm16479-201ENSMUST00000121706 932 ntBASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atf7Q8R0S1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.29■□□□□ 0.04
Atf7Q8R0S1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Gm2231-201ENSMUST00000125661 612 ntBASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Gm22331-201ENSMUST00000158066 136 ntBASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf7Q8R0S1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms