Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Gm11745-201ENSMUST00000121669 448 ntBASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Gm45612-201ENSMUST00000211320 160 ntBASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ebf4Q8K4J2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Mir8117-201ENSMUST00000184773 107 ntBASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gm37935-201ENSMUST00000192012 982 ntBASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gm17330-201ENSMUST00000221047 165 ntBASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf4Q8K4J2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ebf4Q8K4J2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms