Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 AC124433.1-202ENSMUST00000224762 1535 ntBASIC8.17□□□□□ -1.1
Cystm1Q8K353 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cystm1Q8K353 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC8.16□□□□□ -1.1
Cystm1Q8K353 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm17837-201ENSMUST00000186435 985 ntBASIC8.16□□□□□ -1.1
Cystm1Q8K353 Ighv8-7-201ENSMUST00000194349 297 ntBASIC8.16□□□□□ -1.1
Cystm1Q8K353 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Klk2-ps-201ENSMUST00000205342 571 ntBASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 AC164565.1-201ENSMUST00000217520 1484 ntBASIC8.16□□□□□ -1.1
Cystm1Q8K353 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Btrc-209ENSMUST00000224478 2194 ntBASIC8.16□□□□□ -1.1
Cystm1Q8K353 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm5989-201ENSMUST00000096092 2077 ntBASIC8.16□□□□□ -1.1
Cystm1Q8K353 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Gm45496-201ENSMUST00000209918 2917 ntBASIC8.16□□□□□ -1.1
Cystm1Q8K353 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cystm1Q8K353 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.15□□□□□ -1.1
Cystm1Q8K353 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cystm1Q8K353 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cystm1Q8K353 Gm5124-202ENSMUST00000132683 2083 ntBASIC8.15□□□□□ -1.1
Cystm1Q8K353 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cystm1Q8K353 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Cystm1Q8K353 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Cystm1Q8K353 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Cystm1Q8K353 Gm4782-201ENSMUST00000168705 2046 ntBASIC8.15□□□□□ -1.1
Cystm1Q8K353 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cystm1Q8K353 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC8.15□□□□□ -1.1
Cystm1Q8K353 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms