Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Gm45668-201ENSMUST00000211271 493 ntBASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cchcr1Q8K2I2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cchcr1Q8K2I2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cchcr1Q8K2I2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cchcr1Q8K2I2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Cchcr1Q8K2I2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cchcr1Q8K2I2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Cchcr1Q8K2I2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cchcr1Q8K2I2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cchcr1Q8K2I2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Gm2495-201ENSMUST00000191160 466 ntBASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Gm2423-201ENSMUST00000074863 733 ntBASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cchcr1Q8K2I2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Gm12928-201ENSMUST00000117115 573 ntBASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cchcr1Q8K2I2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms