Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CroccQ8CJ40 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CroccQ8CJ40 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CroccQ8CJ40 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CroccQ8CJ40 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CroccQ8CJ40 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Gm4768-201ENSMUST00000206199 686 ntBASIC12.39□□□□□ -0.43
CroccQ8CJ40 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.39□□□□□ -0.43
CroccQ8CJ40 Gm5035-201ENSMUST00000215581 927 ntBASIC12.39□□□□□ -0.43
CroccQ8CJ40 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
CroccQ8CJ40 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.39□□□□□ -0.43
CroccQ8CJ40 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.39□□□□□ -0.43
CroccQ8CJ40 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.39□□□□□ -0.43
CroccQ8CJ40 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.39□□□□□ -0.43
CroccQ8CJ40 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.39□□□□□ -0.43
CroccQ8CJ40 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CroccQ8CJ40 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Gm44069-201ENSMUST00000204898 506 ntBASIC12.38□□□□□ -0.43
CroccQ8CJ40 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Gm8805-201ENSMUST00000117848 313 ntBASIC12.38□□□□□ -0.43
CroccQ8CJ40 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CroccQ8CJ40 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CroccQ8CJ40 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CroccQ8CJ40 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CroccQ8CJ40 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CroccQ8CJ40 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CroccQ8CJ40 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms