Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CopaQ8CIE6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CopaQ8CIE6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CopaQ8CIE6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm12403-201ENSMUST00000121384 959 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm8810-201ENSMUST00000172895 754 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
CopaQ8CIE6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CopaQ8CIE6 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.27□□□□□ -0.29
CopaQ8CIE6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.26□□□□□ -0.29
CopaQ8CIE6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.26□□□□□ -0.29
CopaQ8CIE6 Itm2b-204ENSMUST00000228637 783 ntBASIC13.26□□□□□ -0.29
CopaQ8CIE6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopaQ8CIE6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.25□□□□□ -0.29
CopaQ8CIE6 Gm10156-201ENSMUST00000122364 462 ntBASIC13.25□□□□□ -0.29
CopaQ8CIE6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Gm38144-201ENSMUST00000192790 465 ntBASIC13.25□□□□□ -0.29
CopaQ8CIE6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.25□□□□□ -0.29
CopaQ8CIE6 Gm40466-201ENSMUST00000212174 422 ntBASIC13.25□□□□□ -0.29
CopaQ8CIE6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.25□□□□□ -0.29
CopaQ8CIE6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.25□□□□□ -0.29
CopaQ8CIE6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopaQ8CIE6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms