Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc5Q8CG46 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC16.02■□□□□ 0.16
Smc5Q8CG46 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.02■□□□□ 0.16
Smc5Q8CG46 Gm19817-201ENSMUST00000199764 2132 ntBASIC16.02■□□□□ 0.16
Smc5Q8CG46 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc5Q8CG46 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc5Q8CG46 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc5Q8CG46 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc5Q8CG46 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.02■□□□□ 0.15
Smc5Q8CG46 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Smc5Q8CG46 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Smc5Q8CG46 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc5Q8CG46 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc5Q8CG46 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.01■□□□□ 0.15
Smc5Q8CG46 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.01■□□□□ 0.15
Smc5Q8CG46 Gm18307-201ENSMUST00000206864 949 ntBASIC16.01■□□□□ 0.15
Smc5Q8CG46 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.01■□□□□ 0.15
Smc5Q8CG46 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.01■□□□□ 0.15
Smc5Q8CG46 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Gm26035-201ENSMUST00000083065 308 ntBASIC16.01■□□□□ 0.15
Smc5Q8CG46 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc5Q8CG46 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Smc5Q8CG46 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16■□□□□ 0.15
Smc5Q8CG46 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Gm2420-201ENSMUST00000119864 2149 ntBASIC16■□□□□ 0.15
Smc5Q8CG46 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16■□□□□ 0.15
Smc5Q8CG46 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16■□□□□ 0.15
Smc5Q8CG46 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Gm28631-201ENSMUST00000190740 334 ntBASIC16■□□□□ 0.15
Smc5Q8CG46 Gm10576-201ENSMUST00000191927 825 ntBASIC16■□□□□ 0.15
Smc5Q8CG46 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16■□□□□ 0.15
Smc5Q8CG46 Gm44872-201ENSMUST00000207864 420 ntBASIC16■□□□□ 0.15
Smc5Q8CG46 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc5Q8CG46 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms