Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28aQ8CEI3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Gm9797-201ENSMUST00000052902 613 ntBASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28aQ8CEI3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gm27306-201ENSMUST00000183970 107 ntBASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28aQ8CEI3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms