Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc28bQ8CEG5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28bQ8CEG5 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Ccdc28bQ8CEG5 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28bQ8CEG5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc28bQ8CEG5 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Gm24447-201ENSMUST00000083977 338 ntBASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc28bQ8CEG5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Gm7063-201ENSMUST00000186840 981 ntBASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc28bQ8CEG5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc28bQ8CEG5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms