Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Mir6990-201ENSMUST00000183724 91 ntBASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Gm46209-201ENSMUST00000217912 553 ntBASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc49a3Q8CE47 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc49a3Q8CE47 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc49a3Q8CE47 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc49a3Q8CE47 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Gm15653-201ENSMUST00000119247 907 ntBASIC11.88□□□□□ -0.51
Slc49a3Q8CE47 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms