Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Gm18473-201ENSMUST00000220543 868 ntBASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc38Q8CDN8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc38Q8CDN8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc38Q8CDN8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc38Q8CDN8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc38Q8CDN8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc38Q8CDN8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc38Q8CDN8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Gm6152-201ENSMUST00000151704 340 ntBASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.45□□□□□ -0.1
Ccdc38Q8CDN8 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc38Q8CDN8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms