Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lysmd4Q8CC84 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Gm11978-201ENSMUST00000122315 466 ntBASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Gm17837-201ENSMUST00000186435 985 ntBASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Lysmd4Q8CC84 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Rubie-203ENSMUST00000227803 2430 ntBASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Gm19078-201ENSMUST00000206311 727 ntBASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Gm9063-201ENSMUST00000223299 582 ntBASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lysmd4Q8CC84 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms