Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.22□□□□□ -0.45
Ska3Q8C263 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Ska3Q8C263 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.22□□□□□ -0.45
Ska3Q8C263 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Gm37497-201ENSMUST00000195830 798 ntBASIC12.22□□□□□ -0.45
Ska3Q8C263 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.22□□□□□ -0.45
Ska3Q8C263 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ska3Q8C263 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska3Q8C263 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.21□□□□□ -0.45
Ska3Q8C263 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ska3Q8C263 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.21□□□□□ -0.45
Ska3Q8C263 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ska3Q8C263 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.21□□□□□ -0.45
Ska3Q8C263 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ska3Q8C263 Gm27331-201ENSMUST00000183705 60 ntBASIC12.21□□□□□ -0.45
Ska3Q8C263 Gm28693-202ENSMUST00000190758 331 ntBASIC12.21□□□□□ -0.45
Ska3Q8C263 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.21□□□□□ -0.45
Ska3Q8C263 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ska3Q8C263 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.21□□□□□ -0.45
Ska3Q8C263 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.21□□□□□ -0.45
Ska3Q8C263 Gm6458-201ENSMUST00000211573 635 ntBASIC12.21□□□□□ -0.45
Ska3Q8C263 Gm29705-201ENSMUST00000212598 474 ntBASIC12.21□□□□□ -0.45
Ska3Q8C263 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.21□□□□□ -0.45
Ska3Q8C263 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ska3Q8C263 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ska3Q8C263 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.21□□□□□ -0.46
Ska3Q8C263 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ska3Q8C263 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ska3Q8C263 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ska3Q8C263 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.21□□□□□ -0.46
Ska3Q8C263 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ska3Q8C263 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ska3Q8C263 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.21□□□□□ -0.46
Ska3Q8C263 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ska3Q8C263 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.21□□□□□ -0.46
Ska3Q8C263 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ska3Q8C263 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ska3Q8C263 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ska3Q8C263 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ska3Q8C263 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.2□□□□□ -0.46
Ska3Q8C263 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ska3Q8C263 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ska3Q8C263 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ska3Q8C263 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ska3Q8C263 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ska3Q8C263 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ska3Q8C263 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.2□□□□□ -0.46
Ska3Q8C263 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.2□□□□□ -0.46
Ska3Q8C263 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ska3Q8C263 Gm12390-201ENSMUST00000117897 397 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms