Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Gm22323-201ENSMUST00000103832 109 ntBASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Gm11964-201ENSMUST00000120982 444 ntBASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Gm21769-201ENSMUST00000211922 111 ntBASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Grk6-205ENSMUST00000224653 2976 ntBASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sh3rf2Q8BZT2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Gm23363-201ENSMUST00000175024 79 ntBASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Gm5904-201ENSMUST00000210286 865 ntBASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh3rf2Q8BZT2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Gm11222-201ENSMUST00000119005 738 ntBASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Gm20482-202ENSMUST00000174729 825 ntBASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms