Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Gm22323-201ENSMUST00000103832 109 ntBASIC18.22■□□□□ 0.51
Usp47Q8BY87 Gm11531-201ENSMUST00000117614 555 ntBASIC18.22■□□□□ 0.51
Usp47Q8BY87 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp47Q8BY87 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp47Q8BY87 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp47Q8BY87 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Gm3052-202ENSMUST00000188254 2224 ntBASIC18.22■□□□□ 0.51
Usp47Q8BY87 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp47Q8BY87 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Gm2546-201ENSMUST00000182630 991 ntBASIC18.21■□□□□ 0.51
Usp47Q8BY87 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC18.21■□□□□ 0.51
Usp47Q8BY87 AC108416.1-202ENSMUST00000228927 1201 ntBASIC18.21■□□□□ 0.51
Usp47Q8BY87 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp47Q8BY87 Gm37861-201ENSMUST00000193534 2869 ntBASIC18.2■□□□□ 0.5
Usp47Q8BY87 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Gm37737-201ENSMUST00000195013 1638 ntBASIC18.2■□□□□ 0.5
Usp47Q8BY87 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp47Q8BY87 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Gm15703-201ENSMUST00000120250 880 ntBASIC18.19■□□□□ 0.5
Usp47Q8BY87 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 AC166095.1-201ENSMUST00000223731 1241 ntBASIC18.19■□□□□ 0.5
Usp47Q8BY87 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC18.19■□□□□ 0.5
Usp47Q8BY87 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp47Q8BY87 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms