Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm17330-201ENSMUST00000221047 165 ntBASIC11.56□□□□□ -0.56
Ube3dQ8BX13 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ube3dQ8BX13 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Gm13612-201ENSMUST00000119276 390 ntBASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Gm27847-201ENSMUST00000183711 107 ntBASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Gm27375-201ENSMUST00000183799 107 ntBASIC11.55□□□□□ -0.56
Ube3dQ8BX13 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.55□□□□□ -0.56
Ube3dQ8BX13 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ube3dQ8BX13 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Gm18473-201ENSMUST00000220543 868 ntBASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ube3dQ8BX13 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms