Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SprnQ8BWU1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Gm38144-201ENSMUST00000192790 465 ntBASIC11.46□□□□□ -0.57
SprnQ8BWU1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SprnQ8BWU1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.46□□□□□ -0.58
SprnQ8BWU1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SprnQ8BWU1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Gm12859-201ENSMUST00000117834 427 ntBASIC11.45□□□□□ -0.58
SprnQ8BWU1 Gm14928-201ENSMUST00000120198 477 ntBASIC11.45□□□□□ -0.58
SprnQ8BWU1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Gm9522-201ENSMUST00000182394 926 ntBASIC11.45□□□□□ -0.58
SprnQ8BWU1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.45□□□□□ -0.58
SprnQ8BWU1 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.45□□□□□ -0.58
SprnQ8BWU1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.45□□□□□ -0.58
SprnQ8BWU1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Gm20445-201ENSMUST00000061905 565 ntBASIC11.45□□□□□ -0.58
SprnQ8BWU1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SprnQ8BWU1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms