Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Gm8927-201ENSMUST00000181978 981 ntBASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Gm6218-201ENSMUST00000219812 628 ntBASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Gm3222-201ENSMUST00000071282 990 ntBASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Fam43aQ8BUP8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Gm24694-201ENSMUST00000180054 110 ntBASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Gm27663-201ENSMUST00000184839 110 ntBASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Gm17244-201ENSMUST00000192482 3416 ntBASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fam43aQ8BUP8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Gm13385-201ENSMUST00000121089 220 ntBASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Gm21854-201ENSMUST00000179901 471 ntBASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Gm2445-201ENSMUST00000182798 989 ntBASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam43aQ8BUP8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms