Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Gm7287-201ENSMUST00000205267 602 ntBASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4Q8BQZ5 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Gm15371-201ENSMUST00000117057 784 ntBASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Mir1894-201ENSMUST00000122802 81 ntBASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Gm17150-201ENSMUST00000165577 381 ntBASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4Q8BQZ5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cpsf4Q8BQZ5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cpsf4Q8BQZ5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Gm8652-201ENSMUST00000181363 964 ntBASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Gm27839-201ENSMUST00000184242 106 ntBASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms