Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Gm24694-201ENSMUST00000180054 110 ntBASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Gm27663-201ENSMUST00000184839 110 ntBASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Gm38223-201ENSMUST00000194484 695 ntBASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdhr3Q8BL00 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Gm22189-201ENSMUST00000103822 86 ntBASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Gm14719-201ENSMUST00000121891 340 ntBASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Mir7684-201ENSMUST00000183858 60 ntBASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr3Q8BL00 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.31□□□□□ -0.6
Cdhr3Q8BL00 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms