Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Gm28760-201ENSMUST00000185995 736 ntBASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Gm44855-201ENSMUST00000205725 362 ntBASIC12.55□□□□□ -0.4
Rnf38Q8BI21 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Gm26315-201ENSMUST00000083890 321 ntBASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf38Q8BI21 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gm42612-201ENSMUST00000197986 623 ntBASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gm43170-201ENSMUST00000199827 612 ntBASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gm42550-201ENSMUST00000201553 960 ntBASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.54□□□□□ -0.4
Rnf38Q8BI21 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf38Q8BI21 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.53□□□□□ -0.4
Rnf38Q8BI21 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf38Q8BI21 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms