Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Gm15653-201ENSMUST00000119247 907 ntBASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc5a7Q8BGY9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Slc5a7Q8BGY9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Slc5a7Q8BGY9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Gm15240-201ENSMUST00000118156 720 ntBASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Gm27772-201ENSMUST00000184900 187 ntBASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc5a7Q8BGY9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Gm18206-201ENSMUST00000207027 926 ntBASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms