Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Gm12203-201ENSMUST00000118235 598 ntBASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Gm13369-201ENSMUST00000119442 987 ntBASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Gm12209-201ENSMUST00000120089 596 ntBASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Gm27486-201ENSMUST00000184923 80 ntBASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim65Q8BFW4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Trim65Q8BFW4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trim65Q8BFW4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gm27839-201ENSMUST00000184242 106 ntBASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim65Q8BFW4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.89□□□□□ -0.19
Trim65Q8BFW4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Gm22331-201ENSMUST00000158066 136 ntBASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Gm37497-201ENSMUST00000195830 798 ntBASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim65Q8BFW4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms