Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.84□□□□□ -0.35
Ubp1Q811S7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.84□□□□□ -0.35
Ubp1Q811S7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.84□□□□□ -0.35
Ubp1Q811S7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ubp1Q811S7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ubp1Q811S7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Ubp1Q811S7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ubp1Q811S7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ubp1Q811S7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.83□□□□□ -0.35
Ubp1Q811S7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ubp1Q811S7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Gm15824-201ENSMUST00000119516 955 ntBASIC12.83□□□□□ -0.36
Ubp1Q811S7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.83□□□□□ -0.36
Ubp1Q811S7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Gm6266-201ENSMUST00000203844 806 ntBASIC12.83□□□□□ -0.36
Ubp1Q811S7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.83□□□□□ -0.36
Ubp1Q811S7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubp1Q811S7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.82□□□□□ -0.36
Ubp1Q811S7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm13123-201ENSMUST00000122173 492 ntBASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm27331-201ENSMUST00000183705 60 ntBASIC12.82□□□□□ -0.36
Ubp1Q811S7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm37922-201ENSMUST00000195596 455 ntBASIC12.82□□□□□ -0.36
Ubp1Q811S7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm19931-201ENSMUST00000198920 368 ntBASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Gm29705-201ENSMUST00000212598 474 ntBASIC12.82□□□□□ -0.36
Ubp1Q811S7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.82□□□□□ -0.36
Ubp1Q811S7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubp1Q811S7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.81□□□□□ -0.36
Ubp1Q811S7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.81□□□□□ -0.36
Ubp1Q811S7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms