Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vrk1Q80X41 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Vrk1Q80X41 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.4□□□□□ -0.42
Vrk1Q80X41 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm11964-201ENSMUST00000120982 444 ntBASIC12.4□□□□□ -0.42
Vrk1Q80X41 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm8738-201ENSMUST00000172606 329 ntBASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.4□□□□□ -0.42
Vrk1Q80X41 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.4□□□□□ -0.42
Vrk1Q80X41 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.4□□□□□ -0.42
Vrk1Q80X41 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.4□□□□□ -0.42
Vrk1Q80X41 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.4□□□□□ -0.42
Vrk1Q80X41 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.4□□□□□ -0.42
Vrk1Q80X41 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vrk1Q80X41 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Vrk1Q80X41 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vrk1Q80X41 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.4□□□□□ -0.43
Vrk1Q80X41 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vrk1Q80X41 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vrk1Q80X41 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Gm10434-201ENSMUST00000101158 471 ntBASIC12.39□□□□□ -0.43
Vrk1Q80X41 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Gm11222-201ENSMUST00000119005 738 ntBASIC12.39□□□□□ -0.43
Vrk1Q80X41 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Mir433-201ENSMUST00000093564 124 ntBASIC12.39□□□□□ -0.43
Vrk1Q80X41 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vrk1Q80X41 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.38□□□□□ -0.43
Vrk1Q80X41 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vrk1Q80X41 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.38□□□□□ -0.43
Vrk1Q80X41 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Vrk1Q80X41 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vrk1Q80X41 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.38□□□□□ -0.43
Vrk1Q80X41 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.38□□□□□ -0.43
Vrk1Q80X41 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vrk1Q80X41 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms