Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm3961-201ENSMUST00000204425 994 ntBASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm18935-201ENSMUST00000212692 664 ntBASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm19163-201ENSMUST00000223313 780 ntBASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh8Q7TSK3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Gm11637-201ENSMUST00000120601 592 ntBASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Gm43118-201ENSMUST00000199149 775 ntBASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh8Q7TSK3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Gm28693-202ENSMUST00000190758 331 ntBASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Gm44364-201ENSMUST00000198368 141 ntBASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 Gm10608-202ENSMUST00000213924 676 ntBASIC12.79□□□□□ -0.36
Pcdh8Q7TSK3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms