Protein–RNA interactions for Protein: Q7TQK5

Ccdc93, Coiled-coil domain-containing protein 93, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc93Q7TQK5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc93Q7TQK5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Gm14109-201ENSMUST00000118814 309 ntBASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Gm11331-201ENSMUST00000119764 288 ntBASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Gm9083-201ENSMUST00000120423 819 ntBASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Gm8885-201ENSMUST00000189382 598 ntBASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc93Q7TQK5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Gm27023-201ENSMUST00000182372 285 ntBASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Gm3096-201ENSMUST00000185770 364 ntBASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc93Q7TQK5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Gm44262-201ENSMUST00000204969 372 ntBASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Gm8385-201ENSMUST00000058999 643 ntBASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc93Q7TQK5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms