Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Gm12291-201ENSMUST00000121627 311 ntBASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Gm23363-201ENSMUST00000175024 79 ntBASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Gm8227-201ENSMUST00000223306 571 ntBASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ubfd1Q78JW9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Gm15370-201ENSMUST00000117158 253 ntBASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Gm4986-201ENSMUST00000119731 549 ntBASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubfd1Q78JW9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms