Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Gm23699-201ENSMUST00000158835 135 ntBASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Gm9550-201ENSMUST00000161130 862 ntBASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Gm7467-201ENSMUST00000185173 652 ntBASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Gm45598-202ENSMUST00000210719 986 ntBASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Gm7848-201ENSMUST00000210739 718 ntBASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Gm18730-201ENSMUST00000218038 343 ntBASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ddx55Q6ZPL9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Gm15782-201ENSMUST00000121073 445 ntBASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Gm18734-201ENSMUST00000172937 808 ntBASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Gm28882-201ENSMUST00000185504 314 ntBASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Gm39404-201ENSMUST00000216350 313 ntBASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ddx55Q6ZPL9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Gm13611-201ENSMUST00000118269 318 ntBASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Gm9211-201ENSMUST00000182882 975 ntBASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Spcs1-203ENSMUST00000226374 592 ntBASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx55Q6ZPL9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms