Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.02■□□□□ -0
Nup98Q6PFD9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nup98Q6PFD9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nup98Q6PFD9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Nup98Q6PFD9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.02■□□□□ -0
Nup98Q6PFD9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.02■□□□□ -0
Nup98Q6PFD9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Nup98Q6PFD9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.02■□□□□ -0
Nup98Q6PFD9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Nup98Q6PFD9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.02■□□□□ -0
Nup98Q6PFD9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.02■□□□□ -0
Nup98Q6PFD9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Nup98Q6PFD9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Nup98Q6PFD9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nup98Q6PFD9 Gm9555-201ENSMUST00000200908 583 ntBASIC15.02■□□□□ -0
Nup98Q6PFD9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nup98Q6PFD9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nup98Q6PFD9 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.02■□□□□ -0
Nup98Q6PFD9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nup98Q6PFD9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nup98Q6PFD9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup98Q6PFD9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Gm18041-201ENSMUST00000218210 618 ntBASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.01□□□□□ -0.01
Nup98Q6PFD9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Nsd1-205ENSMUST00000224693 852 ntBASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.01□□□□□ -0.01
Nup98Q6PFD9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nup98Q6PFD9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15□□□□□ -0.01
Nup98Q6PFD9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15□□□□□ -0.01
Nup98Q6PFD9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 Gm24934-201ENSMUST00000103764 111 ntBASIC15□□□□□ -0.01
Nup98Q6PFD9 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15□□□□□ -0.01
Nup98Q6PFD9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15□□□□□ -0.01
Nup98Q6PFD9 Gm5616-201ENSMUST00000165252 384 ntBASIC15□□□□□ -0.01
Nup98Q6PFD9 Gm17040-202ENSMUST00000170597 889 ntBASIC15□□□□□ -0.01
Nup98Q6PFD9 Gm8741-201ENSMUST00000174736 384 ntBASIC15□□□□□ -0.01
Nup98Q6PFD9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nup98Q6PFD9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nup98Q6PFD9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup98Q6PFD9 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15□□□□□ -0.01
Nup98Q6PFD9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nup98Q6PFD9 Gm14760-201ENSMUST00000121831 999 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms