Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Gm24694-201ENSMUST00000180054 110 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Gm27663-201ENSMUST00000184839 110 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Gm28760-201ENSMUST00000185995 736 ntBASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Gm42550-201ENSMUST00000201553 960 ntBASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd3Q6P9Z1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smarcd3Q6P9Z1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smarcd3Q6P9Z1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.9□□□□□ -0.51
Smarcd3Q6P9Z1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Gm12151-201ENSMUST00000121374 290 ntBASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Gm14719-201ENSMUST00000121891 340 ntBASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms