Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Matn2-203ENSMUST00000226766 3252 ntBASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.34□□□□□ -0.11
Krt39Q6IFX4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.33□□□□□ -0.11
Krt39Q6IFX4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.33□□□□□ -0.11
Krt39Q6IFX4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Krt39Q6IFX4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.33□□□□□ -0.11
Krt39Q6IFX4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Krt39Q6IFX4 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Gm11978-201ENSMUST00000122315 466 ntBASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Gm38223-201ENSMUST00000194484 695 ntBASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.33□□□□□ -0.12
Krt39Q6IFX4 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt39Q6IFX4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt39Q6IFX4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms