Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC16.45■□□□□ 0.22
Clcn1Q64347 Gm5950-201ENSMUST00000213337 772 ntBASIC16.45■□□□□ 0.22
Clcn1Q64347 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.45■□□□□ 0.22
Clcn1Q64347 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.45■□□□□ 0.22
Clcn1Q64347 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.45■□□□□ 0.22
Clcn1Q64347 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Clcn1Q64347 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clcn1Q64347 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Clcn1Q64347 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clcn1Q64347 Gm44414-201ENSMUST00000203660 2109 ntBASIC16.45■□□□□ 0.22
Clcn1Q64347 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn1Q64347 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.45■□□□□ 0.22
Clcn1Q64347 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Clcn1Q64347 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcn1Q64347 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clcn1Q64347 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.44■□□□□ 0.22
Clcn1Q64347 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Gm10434-201ENSMUST00000101158 471 ntBASIC16.44■□□□□ 0.22
Clcn1Q64347 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clcn1Q64347 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcn1Q64347 Gm38116-201ENSMUST00000193873 1533 ntBASIC16.44■□□□□ 0.22
Clcn1Q64347 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clcn1Q64347 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Clcn1Q64347 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcn1Q64347 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Clcn1Q64347 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn1Q64347 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Ntrk2-204ENSMUST00000224259 3049 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.43■□□□□ 0.22
Clcn1Q64347 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.43■□□□□ 0.22
Clcn1Q64347 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC16.43■□□□□ 0.22
Clcn1Q64347 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Clcn1Q64347 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Gm13875-201ENSMUST00000120162 282 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Gm2260-201ENSMUST00000184965 657 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Gm31256-201ENSMUST00000194705 506 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Clcn1Q64347 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Clcn1Q64347 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.43■□□□□ 0.22
Clcn1Q64347 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Clcn1Q64347 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn1Q64347 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms