Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.85□□□□□ -0.51
VcanQ62059 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Gm7211-201ENSMUST00000172692 1118 ntBASIC11.84□□□□□ -0.51
VcanQ62059 Gm9230-201ENSMUST00000188228 532 ntBASIC11.84□□□□□ -0.51
VcanQ62059 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.84□□□□□ -0.51
VcanQ62059 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.84□□□□□ -0.51
VcanQ62059 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Gm4726-201ENSMUST00000135604 736 ntBASIC11.84□□□□□ -0.51
VcanQ62059 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.84□□□□□ -0.51
VcanQ62059 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.84□□□□□ -0.51
VcanQ62059 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.84□□□□□ -0.51
VcanQ62059 Gm6019-201ENSMUST00000148369 736 ntBASIC11.84□□□□□ -0.51
VcanQ62059 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Gm8584-201ENSMUST00000171982 758 ntBASIC11.84□□□□□ -0.51
VcanQ62059 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Gm27910-201ENSMUST00000185004 107 ntBASIC11.84□□□□□ -0.51
VcanQ62059 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.84□□□□□ -0.51
VcanQ62059 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.84□□□□□ -0.51
VcanQ62059 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.84□□□□□ -0.51
VcanQ62059 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
VcanQ62059 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.84□□□□□ -0.51
VcanQ62059 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.84□□□□□ -0.51
VcanQ62059 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.84□□□□□ -0.51
VcanQ62059 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VcanQ62059 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
VcanQ62059 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
VcanQ62059 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VcanQ62059 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.83□□□□□ -0.52
VcanQ62059 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.83□□□□□ -0.52
VcanQ62059 Gm20414-201ENSMUST00000172918 646 ntBASIC11.83□□□□□ -0.52
VcanQ62059 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.83□□□□□ -0.52
VcanQ62059 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
VcanQ62059 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
VcanQ62059 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.83□□□□□ -0.52
VcanQ62059 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
VcanQ62059 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
VcanQ62059 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VcanQ62059 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
VcanQ62059 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
VcanQ62059 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms