Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.88□□□□□ -0.51
Cd47Q61735 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.88□□□□□ -0.51
Cd47Q61735 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.88□□□□□ -0.51
Cd47Q61735 Gm16215-201ENSMUST00000161990 637 ntBASIC11.88□□□□□ -0.51
Cd47Q61735 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.88□□□□□ -0.51
Cd47Q61735 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.88□□□□□ -0.51
Cd47Q61735 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.88□□□□□ -0.51
Cd47Q61735 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.88□□□□□ -0.51
Cd47Q61735 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.88□□□□□ -0.51
Cd47Q61735 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cd47Q61735 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cd47Q61735 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.88□□□□□ -0.51
Cd47Q61735 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd47Q61735 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.87□□□□□ -0.51
Cd47Q61735 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.87□□□□□ -0.51
Cd47Q61735 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cd47Q61735 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.87□□□□□ -0.51
Cd47Q61735 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Cd47Q61735 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.87□□□□□ -0.51
Cd47Q61735 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cd47Q61735 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.87□□□□□ -0.51
Cd47Q61735 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.87□□□□□ -0.51
Cd47Q61735 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.87□□□□□ -0.51
Cd47Q61735 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.87□□□□□ -0.51
Cd47Q61735 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.87□□□□□ -0.51
Cd47Q61735 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.87□□□□□ -0.51
Cd47Q61735 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.87□□□□□ -0.51
Cd47Q61735 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.87□□□□□ -0.51
Cd47Q61735 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cd47Q61735 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.87□□□□□ -0.51
Cd47Q61735 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.87□□□□□ -0.51
Cd47Q61735 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.87□□□□□ -0.51
Cd47Q61735 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd47Q61735 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Cd47Q61735 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd47Q61735 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd47Q61735 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd47Q61735 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms