Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Zic4Q61467 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.49□□□□□ -0.73
Zic4Q61467 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.49□□□□□ -0.73
Zic4Q61467 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Zic4Q61467 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Zic4Q61467 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Zic4Q61467 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Zic4Q61467 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.48□□□□□ -0.73
Zic4Q61467 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.48□□□□□ -0.73
Zic4Q61467 Gm24158-201ENSMUST00000175263 71 ntBASIC10.48□□□□□ -0.73
Zic4Q61467 Gm9630-201ENSMUST00000178304 885 ntBASIC10.48□□□□□ -0.73
Zic4Q61467 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.48□□□□□ -0.73
Zic4Q61467 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.48□□□□□ -0.73
Zic4Q61467 Gm19184-201ENSMUST00000196798 928 ntBASIC10.48□□□□□ -0.73
Zic4Q61467 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Zic4Q61467 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Zic4Q61467 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.48□□□□□ -0.73
Zic4Q61467 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.48□□□□□ -0.73
Zic4Q61467 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zic4Q61467 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Zic4Q61467 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Zic4Q61467 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Zic4Q61467 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Gm15467-201ENSMUST00000120582 445 ntBASIC10.47□□□□□ -0.73
Zic4Q61467 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.47□□□□□ -0.73
Zic4Q61467 Gm3436-201ENSMUST00000179930 840 ntBASIC10.47□□□□□ -0.73
Zic4Q61467 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.47□□□□□ -0.73
Zic4Q61467 Mzt1-203ENSMUST00000227948 952 ntBASIC10.47□□□□□ -0.73
Zic4Q61467 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Zic4Q61467 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Zic4Q61467 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Zic4Q61467 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zic4Q61467 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms