Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ClpbQ60649 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ClpbQ60649 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ClpbQ60649 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Gm11425-201ENSMUST00000119608 498 ntBASIC12.47□□□□□ -0.41
ClpbQ60649 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.47□□□□□ -0.41
ClpbQ60649 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.47□□□□□ -0.41
ClpbQ60649 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.47□□□□□ -0.41
ClpbQ60649 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.47□□□□□ -0.41
ClpbQ60649 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.47□□□□□ -0.41
ClpbQ60649 Gm16372-201ENSMUST00000073088 450 ntBASIC12.47□□□□□ -0.41
ClpbQ60649 Gm9396-201ENSMUST00000076703 567 ntBASIC12.47□□□□□ -0.41
ClpbQ60649 Gm6091-201ENSMUST00000098307 165 ntBASIC12.47□□□□□ -0.41
ClpbQ60649 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ClpbQ60649 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ClpbQ60649 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ClpbQ60649 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.47□□□□□ -0.41
ClpbQ60649 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.47□□□□□ -0.41
ClpbQ60649 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ClpbQ60649 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.46□□□□□ -0.41
ClpbQ60649 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.46□□□□□ -0.41
ClpbQ60649 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ClpbQ60649 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.46□□□□□ -0.41
ClpbQ60649 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ClpbQ60649 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
ClpbQ60649 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Gm8213-201ENSMUST00000118191 441 ntBASIC12.46□□□□□ -0.41
ClpbQ60649 Gm24644-201ENSMUST00000157114 139 ntBASIC12.46□□□□□ -0.41
ClpbQ60649 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.46□□□□□ -0.41
ClpbQ60649 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.46□□□□□ -0.41
ClpbQ60649 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.46□□□□□ -0.41
ClpbQ60649 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
ClpbQ60649 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.46□□□□□ -0.41
ClpbQ60649 Gm7561-201ENSMUST00000211203 886 ntBASIC12.46□□□□□ -0.41
ClpbQ60649 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.46□□□□□ -0.41
ClpbQ60649 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
ClpbQ60649 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ClpbQ60649 Gm10012-201ENSMUST00000078252 192 ntBASIC12.46□□□□□ -0.41
ClpbQ60649 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ClpbQ60649 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.46□□□□□ -0.42
ClpbQ60649 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClpbQ60649 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClpbQ60649 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClpbQ60649 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClpbQ60649 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ClpbQ60649 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
ClpbQ60649 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.46□□□□□ -0.42
ClpbQ60649 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ClpbQ60649 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClpbQ60649 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms