Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm45865-201ENSMUST00000211815 945 ntBASIC13.81□□□□□ -0.2
Shroom1Q5SX79 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.81□□□□□ -0.2
Shroom1Q5SX79 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm13297-201ENSMUST00000120205 934 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm12363-201ENSMUST00000122250 668 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm3890-201ENSMUST00000182416 207 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm4857-201ENSMUST00000192718 785 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm5781-201ENSMUST00000219792 443 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shroom1Q5SX79 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Gm27243-201ENSMUST00000183964 521 ntBASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Gm38241-201ENSMUST00000192641 898 ntBASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Gm37042-201ENSMUST00000193816 581 ntBASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Gm37259-201ENSMUST00000193903 849 ntBASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shroom1Q5SX79 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms