Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tsr1Q5SWD9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Gm14301-201ENSMUST00000120181 324 ntBASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Tsr1Q5SWD9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 AC136019.1-201ENSMUST00000226503 1412 ntBASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gm14539-201ENSMUST00000117527 174 ntBASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gm13385-201ENSMUST00000121089 220 ntBASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gm24694-201ENSMUST00000180054 110 ntBASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gm27663-201ENSMUST00000184839 110 ntBASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gm5708-201ENSMUST00000196289 886 ntBASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Syt7-204ENSMUST00000223586 1344 ntBASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tsr1Q5SWD9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tsr1Q5SWD9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms